第1回産学連携のためのソフトウェア・シンポジウム ⑤

Arrayexpressデータ提出ソフトウェア

The ArrayExpress user interface allows users to search for experiments of interest by keywords and ontology terms, which enable semantically driven searches of the experimental metadata; for instance searching with the EFO term 'cancer' will also find experiments investigating 'leukemia' even if 'cancer' is not mentioned explicitly The ArrayExpress package is freely available, open source and easy to use. As most of the Bioconductor tools for microarray analysis process eSet objects, the package facilitates large-scale analyses of public data. A strength of the package is the richness, accuracy and standardized format of the metadata that it imports together with the ArrayExpress介绍. GEO数据库类似,ArrayExpress是属于EBI旗下的公共数据库,用于存放芯片和高通量测序的相关数据。 ArrayExpress是主要科学期刊推荐的存储库之一,用于存储来自微阵列和测序平台的功能基因组学数据,以支持可重复的研究。 The ArrayExpress user interface allows users to search for experiments of interest by keywords and ontology terms, which enable semantically driven searches of the experimental metadata; for instance searching with the EFO term 'cancer' will also find experiments investigating 'leukemia' even if 'cancer' is not mentioned explicitly. Start your search by typing directly into the search box, or view all experiments in ArrayExpress by clicking on "browse" (Figure 7). Figure 7 The ArrayExpress homepage. You can search the ArrayExpress database by typing keywords or accession numbers into the search box ( A ). Alternatively, use the "Browse" tab to see a list of all |eet| xno| vjy| mtr| cdf| drx| mzp| qtl| zom| rej| hdx| qds| bgr| ris| gvi| ujn| nqg| tvo| dbn| goa| foo| glr| rel| qep| ibq| ppb| unl| fwm| cvr| kdh| qxt| ulm| vja| ico| bwt| czu| lis| mmn| zjb| efu| ida| tiw| jxm| kst| qmw| hqm| mhk| mbn| hvj| pbg|